OK, answering my own question.
I referred to https://michaelfranzl.com/2016/11/10/se ... pberry-pi/
I ran this fdtdump to get the device tree
fdtdump /boot/sun50i-h5-nanopi-neo2.dtb
found "i2c@01c2ac00", although I didn't find clock-frequency parameter under it, I still tried fdtput.
sudo fdtput --type u /boot/sun50i-h5-nanopi-neo2.dtb /soc/i2c@01c2ac00 clock-frequency 400000
After reboot, I2C speed boosted to 363K.